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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170124020
CENO01101171
451765
Gammaproteobacteria
GCA
Cys
>WENV170124509
CENO01187314
451765
Gammaproteobacteria
GCA
Cys
>WENV170124255
CENO01118762
65736
Gammaproteobacteria
TAA
Leu
>WENV170124299
CENO01120429
65736
Gammaproteobacteria
TAA
Leu
>WENV170122915
CENO01004927
451853
Gammaproteobacteria
GCA
Cys
>WENV170123347
CENO01035842
451853
Gammaproteobacteria
GCA
Cys
>WENV170123287
CENO01031029
263086
Gammaproteobacteria
GTT
Asn
>WENV170123667
CENO01064099
256945
Gammaproteobacteria
GAA
Phe
>WENV170123928
CENO01090139
256945
Gammaproteobacteria
GAA
Phe
>WENV170124137
CENO01111085
181298
Gammaproteobacteria
>WENV170123688
CENO01066339
259140
Gammaproteobacteria
TGC
Ala
>WENV170122884
CENO01003116
272258
Gammaproteobacteria
GGC
Ala
>WENV170123074
CENO01017787
290512
Gammaproteobacteria
TGT
Thr
>WENV170123304
CENO01032021
105812
Gammaproteobacteria
GTA
Tyr
>WENV170124362
CENO01122365
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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