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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170129248
CENQ01074800
214179
Alphaproteobacteria
CCT
Arg
>WENV170130370
CENQ01291006
396582
Alphaproteobacteria
GAC
Val
>WENV170130274
CENQ01258335
218844
Alphaproteobacteria
CCT
Arg
>WENV170129698
CENQ01123661
448267
Alphaproteobacteria
GCA
Cys
>WENV170129660
CENQ01119963
448545
Alphaproteobacteria
>WENV170128822
CENQ01036920
32122
Alphaproteobacteria
GCT
Ser
>WENV170129797
CENQ01131698
93190
Alphaproteobacteria
CAA
Leu
>WENV170129324
CENQ01083557
278841
Alphaproteobacteria
TTT
Lys
>WENV170129385
CENQ01089423
278841
Alphaproteobacteria
TTT
Lys
>WENV170128422
CENQ01003051
377113
Alphaproteobacteria
GAC
Val
>WENV170129219
CENQ01072413
377113
Alphaproteobacteria
GAC
Val
>WENV170129521
CENQ01105092
207103
Alphaproteobacteria
GTG
His
>WENV170129344
CENQ01084935
163875
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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