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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170129425
CENQ01094778
277731
Bacteroidota
>WENV170129740
CENQ01126911
139505
Bacteroidota
TAC
Val
>WENV170129553
CENQ01109852
220163
Bacteroidota
TCT
Arg
>WENV170128778
CENQ01031719
139484
Bacteroidota
TAC
Val
>WENV170129420
CENQ01094524
57357
Bacteroidota
TGA
Ser
>WENV170129687
CENQ01122511
57357
Bacteroidota
TGA
Ser
>WENV170128772
CENQ01031293
119207
Bacteroidota
TAG
Leu
>WENV170128823
CENQ01036977
50353
Bacteroidota
TGA
Ser
>WENV170129469
CENQ01098270
71400
Bacteroidota
GCT
Ser
>WENV170129488
CENQ01100724
152195
Bacteroidota
TAC
Val
>WENV170129346
CENQ01084981
310118
Bacteroidota
CCA
Trp
>WENV170128849
CENQ01038937
18750
Bacteroidota
GGA
Ser
>WENV170128634
CENQ01020753
301008
Bacteroidota
TTG
Gln
>WENV170128971
CENQ01050719
301008
Bacteroidota
TTG
Gln
>WENV170129298
CENQ01080257
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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