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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170129678
CENQ01121646
277410
Gammaproteobacteria
TTT
Lys
>WENV170129814
CENQ01132833
261853
Gammaproteobacteria
GTT
Asn
>WENV170129616
CENQ01116001
108980
Gammaproteobacteria
TAG
Leu
>WENV170129871
CENQ01136298
108980
Gammaproteobacteria
TAG
Leu
>WENV170129776
CENQ01130377
263392
Gammaproteobacteria
GAA
Phe
>WENV170129794
CENQ01131493
71882
Gammaproteobacteria
TAA
Leu
>WENV170128403
CENQ01001024
65736
Gammaproteobacteria
TAA
Leu
>WENV170128693
CENQ01025866
21308
Gammaproteobacteria
GGA
Ser
>WENV170130345
CENQ01283407
277238
Gammaproteobacteria
GTG
His
>WENV170128957
CENQ01048513
229608
Gammaproteobacteria
CAT
Met
>WENV170129086
CENQ01060837
451853
Gammaproteobacteria
GCA
Cys
>WENV170129705
CENQ01124735
451853
Gammaproteobacteria
GCA
Cys
>WENV170129615
CENQ01116001
279441
Gammaproteobacteria
GTG
His
>WENV170130282
CENQ01260173
164285
Gammaproteobacteria
TCG
Arg
>WENV170129887
CENQ01137388
263086
Gammaproteobacteria
GTT
Asn
>WENV170129328
CENQ01083771
323307
Gammaproteobacteria
GGT
Thr
>WENV170129382
CENQ01089227
307111
Gammaproteobacteria
TAC
Val
>WENV170128402
CENQ01001024
471753
Gammaproteobacteria
GCA
Cys
>WENV170129668
CENQ01120860
471753
Gammaproteobacteria
GCA
Cys
>WENV170129986
CENQ01142789
471753
Gammaproteobacteria
GCA
Cys
>WENV170129383
CENQ01089227
236600
Gammaproteobacteria
GTC
Asp
>WENV170129999
CENQ01143012
236600
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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