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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170131604
CENS01107076
160199
Alphaproteobacteria
GGG
Pro
>WENV170131012
CENS01002816
369984
Alphaproteobacteria
TTG
Gln
>WENV170131591
CENS01101741
448544
Alphaproteobacteria
CTG
Gln
>WENV170131632
CENS01113341
167093
Alphaproteobacteria
GTC
Asp
>WENV170131565
CENS01087151
380306
Alphaproteobacteria
GGT
Thr
>WENV170131427
CENS01061208
160201
Alphaproteobacteria
TGG
Pro
>WENV170131438
CENS01063750
259585
Alphaproteobacteria
CCA
Trp
>WENV170131592
CENS01102614
125595
Alphaproteobacteria
>WENV170131470
CENS01069954
125394
Alphaproteobacteria
CAA
Leu
>WENV170131072
CENS01008477
161011
Alphaproteobacteria
ACG
Arg
>WENV170131073
CENS01008477
161011
Alphaproteobacteria
ACG
Arg
>WENV170131333
CENS01045865
8431
Alphaproteobacteria
GCT
Ser
>WENV170130981
CENS01000022
383286
Alphaproteobacteria
GGT
Thr
>WENV170131037
CENS01005227
448545
Alphaproteobacteria
>WENV170131612
CENS01108640
67505
Alphaproteobacteria
TAA
Leu
>WENV170131525
CENS01075605
160197
Alphaproteobacteria
GTC
Asp
>WENV170131364
CENS01052281
160575
Alphaproteobacteria
CCT
Arg
>WENV170131273
CENS01036908
105591
Alphaproteobacteria
GTA
Tyr
>WENV170131654
CENS01117994
382308
Alphaproteobacteria
GAA
Phe
>WENV170131105
CENS01012469
172838
Alphaproteobacteria
ACG
Arg
>WENV170131325
CENS01044871
105419
Alphaproteobacteria
TAA
Leu
>WENV170131307
CENS01043553
65064
Alphaproteobacteria
GAG
Leu
>WENV170131570
CENS01088740
12053
Alphaproteobacteria
GCT
Ser
>WENV170131191
CENS01021396
161006
Alphaproteobacteria
TGG
Pro
>WENV170131196
CENS01022253
27338
Alphaproteobacteria
CGA
Ser
>WENV170131392
CENS01056437
278105
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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