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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170134251
CENU01090687
139286
Bacteroidota
TGG
Pro
>WENV170133427
CENU01025312
306609
Bacteroidota
GAA
Phe
>WENV170135410
CENU01201169
306609
Bacteroidota
GAA
Phe
>WENV170135660
CENU01273386
137224
Bacteroidota
TGG
Pro
>WENV170134607
CENU01125593
430187
Bacteroidota
GCA
Cys
>WENV170134676
CENU01131841
430187
Bacteroidota
GCA
Cys
>WENV170135609
CENU01240117
236125
Bacteroidota
GAA
Phe
>WENV170135831
CENU01357822
127458
Bacteroidota
GAC
Val
>WENV170133341
CENU01020240
270933
Bacteroidota
CAT
Met
>WENV170135351
CENU01197902
60695
Bacteroidota
GCT
Ser
>WENV170135299
CENU01193226
60695
Bacteroidota
GCT
Ser
>WENV170134876
CENU01152333
127414
Bacteroidota
TGG
Pro
>WENV170135065
CENU01171491
242524
Bacteroidota
GCC
Gly
>WENV170134047
CENU01073264
242524
Bacteroidota
GCC
Gly
>WENV170135181
CENU01183884
17987
Bacteroidota
GGA
Ser
>WENV170134822
CENU01145640
17987
Bacteroidota
GGA
Ser
>WENV170133754
CENU01048195
17496
Bacteroidota
GGA
Ser
>WENV170135092
CENU01173972
148135
Bacteroidota
GGG
Pro
>WENV170135830
CENU01356188
165044
Bacteroidota
GTG
His
>WENV170133766
CENU01048741
145555
Bacteroidota
GTC
Asp
>WENV170134886
CENU01153621
185921
Bacteroidota
GTC
Asp
>WENV170133349
CENU01020493
145507
Bacteroidota
TCT
Arg
>WENV170135941
CENU01397150
103368
Bacteroidota
CAA
Leu
>WENV170134490
CENU01112279
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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