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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170142463
CENY01010315
369984
Alphaproteobacteria
TTG
Gln
>WENV170142675
CENY01021977
214179
Alphaproteobacteria
CCT
Arg
>WENV170144463
CENY01153250
448544
Alphaproteobacteria
CTG
Gln
>WENV170143029
CENY01045083
396582
Alphaproteobacteria
GAC
Val
>WENV170142422
CENY01007691
218844
Alphaproteobacteria
CCT
Arg
>WENV170142730
CENY01024772
75752
Alphaproteobacteria
CAG
Leu
>WENV170143530
CENY01078215
75752
Alphaproteobacteria
CAG
Leu
>WENV170144303
CENY01143211
393349
Alphaproteobacteria
GGT
Thr
>WENV170143978
CENY01113239
383286
Alphaproteobacteria
GGT
Thr
>WENV170145446
CENY01341401
448545
Alphaproteobacteria
>WENV170142287
CENY01000777
406362
Alphaproteobacteria
GAA
Phe
>WENV170145185
CENY01273064
93190
Alphaproteobacteria
CAA
Leu
>WENV170143188
CENY01055513
302187
Alphaproteobacteria
CTT
Lys
>WENV170143308
CENY01062774
377113
Alphaproteobacteria
GAC
Val
>WENV170143935
CENY01110650
124623
Alphaproteobacteria
>WENV170143951
CENY01111345
325069
Alphaproteobacteria
TTT
Lys
>WENV170142979
CENY01041577
107394
Alphaproteobacteria
CAA
Leu
>WENV170143557
CENY01080391
382308
Alphaproteobacteria
GAA
Phe
>WENV170143011
CENY01043302
309182
Alphaproteobacteria
TAC
Val
>WENV170144443
CENY01152240
302408
Alphaproteobacteria
GAA
Phe
>WENV170143932
CENY01110424
65064
Alphaproteobacteria
GAG
Leu
>WENV170144016
CENY01116712
66074
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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