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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170145020
CENY01186993
46671
Cyanobacteriota
TAA
Leu
>WENV170143645
CENY01086080
400868
Cyanobacteriota
TTG
Gln
>WENV170143873
CENY01104271
400868
Cyanobacteriota
TTG
Gln
>WENV170142985
CENY01041696
260661
Cyanobacteriota
>WENV170144652
CENY01165436
105781
Cyanobacteriota
TAG
Leu
>WENV170143329
CENY01063753
161711
Cyanobacteriota
GTC
Asp
>WENV170143961
CENY01112086
161711
Cyanobacteriota
GTC
Asp
>WENV170145037
CENY01197927
160107
Cyanobacteriota
CAT
Met
>WENV170143852
CENY01102190
258993
Cyanobacteriota
CCA
Trp
>WENV170142428
CENY01008377
375129
Cyanobacteriota
TTG
Gln
>WENV170143380
CENY01068373
369944
Cyanobacteriota
GAC
Val
>WENV170144221
CENY01135509
369944
Cyanobacteriota
GAC
Val
>WENV170142355
CENY01004465
369938
Cyanobacteriota
GTT
Asn
>WENV170144005
CENY01115525
65045
Cyanobacteriota
CAG
Leu
>WENV170142375
CENY01005001
89069
Cyanobacteriota
CAA
Leu
>WENV170143492
CENY01075852
41374
Cyanobacteriota
TAA
Leu
>WENV170143143
CENY01051783
225134
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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