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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170152077
CEOE01030645
448879
Alphaproteobacteria
CTG
Gln
>WENV170151973
CEOE01012134
167093
Alphaproteobacteria
GTC
Asp
>WENV170152038
CEOE01023118
167093
Alphaproteobacteria
GTC
Asp
>WENV170152153
CEOE01045226
448621
Alphaproteobacteria
GCA
Cys
>WENV170152062
CEOE01028403
453256
Alphaproteobacteria
CTG
Gln
>WENV170152264
CEOE01066130
448267
Alphaproteobacteria
GCA
Cys
>WENV170152332
CEOE01090577
77637
Alphaproteobacteria
TAA
Leu
>WENV170152016
CEOE01019968
237578
Alphaproteobacteria
GAT
Ile
>WENV170152133
CEOE01041467
259904
Alphaproteobacteria
TTT
Lys
>WENV170152092
CEOE01032611
370458
Alphaproteobacteria
GGT
Thr
>WENV170151841
CEOE01002492
259901
Alphaproteobacteria
GTT
Asn
>WENV170152033
CEOE01022557
114680
Alphaproteobacteria
TAG
Leu
>WENV170151823
CEOE01000227
395582
Alphaproteobacteria
CTC
Glu
>WENV170152260
CEOE01063593
370950
Alphaproteobacteria
TTT
Lys
>WENV170152258
CEOE01062507
206052
Alphaproteobacteria
>WENV170152337
CEOE01091684
477496
Alphaproteobacteria
GCA
Cys
>WENV170152276
CEOE01070380
89275
Alphaproteobacteria
GAG
Leu
>WENV170152305
CEOE01081576
159283
Alphaproteobacteria
ACG
Arg
>WENV170152123
CEOE01038740
88722
Alphaproteobacteria
CAG
Leu
>WENV170152071
CEOE01030193
175700
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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