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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170161261
CEOK01211674
260225
Alphaproteobacteria
GTT
Asn
>WENV170158824
CEOK01021253
328287
Alphaproteobacteria
TGC
Ala
>WENV170160233
CEOK01126528
214179
Alphaproteobacteria
CCT
Arg
>WENV170161608
CEOK01370179
396582
Alphaproteobacteria
GAC
Val
>WENV170159814
CEOK01092729
212253
Alphaproteobacteria
>WENV170160241
CEOK01127012
166628
Alphaproteobacteria
CAT
Met
>WENV170158941
CEOK01028138
259585
Alphaproteobacteria
CCA
Trp
>WENV170160289
CEOK01131148
259585
Alphaproteobacteria
CCA
Trp
>WENV170159565
CEOK01074269
409499
Alphaproteobacteria
TTG
Gln
>WENV170158628
CEOK01010026
393349
Alphaproteobacteria
GGT
Thr
>WENV170159104
CEOK01040828
393349
Alphaproteobacteria
GGT
Thr
>WENV170159480
CEOK01067460
393349
Alphaproteobacteria
GGT
Thr
>WENV170160148
CEOK01119603
369860
Alphaproteobacteria
TTG
Gln
>WENV170158473
CEOK01001375
278841
Alphaproteobacteria
TTT
Lys
>WENV170159710
CEOK01085212
406246
Alphaproteobacteria
GCC
Gly
>WENV170158584
CEOK01007954
203353
Alphaproteobacteria
CAT
Met
>WENV170160971
CEOK01186551
377113
Alphaproteobacteria
GAC
Val
>WENV170158768
CEOK01017644
205335
Alphaproteobacteria
GGG
Pro
>WENV170159354
CEOK01058645
29052
Alphaproteobacteria
GGA
Ser
>WENV170159756
CEOK01088324
372766
Alphaproteobacteria
TTG
Gln
>WENV170160891
CEOK01181296
371034
Alphaproteobacteria
GAC
Val
>WENV170160737
CEOK01172913
51370
Alphaproteobacteria
CAG
Leu
>WENV170159313
CEOK01056108
163875
Alphaproteobacteria
ACG
Arg
>WENV170158756
CEOK01016742
370677
Alphaproteobacteria
GGT
Thr
>WENV170159533
CEOK01071948
32835
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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