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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170160632
CEOK01164983
413342
Bacteroidota
TTC
Glu
>WENV170159759
CEOK01088460
277731
Bacteroidota
>WENV170159657
CEOK01080937
139500
Bacteroidota
TGG
Pro
>WENV170158516
CEOK01003374
166497
Bacteroidota
>WENV170160130
CEOK01118714
139505
Bacteroidota
TAC
Val
>WENV170161515
CEOK01343541
410439
Bacteroidota
GGT
Thr
>WENV170158685
CEOK01013251
50545
Bacteroidota
TAA
Leu
>WENV170161500
CEOK01337575
139484
Bacteroidota
TAC
Val
>WENV170161402
CEOK01297533
152635
Bacteroidota
TAC
Val
>WENV170159121
CEOK01042466
211884
Bacteroidota
TGC
Ala
>WENV170159175
CEOK01046145
211884
Bacteroidota
TGC
Ala
>WENV170159254
CEOK01051877
211884
Bacteroidota
TGC
Ala
>WENV170159725
CEOK01085854
211884
Bacteroidota
TGC
Ala
>WENV170159824
CEOK01093569
211884
Bacteroidota
TGC
Ala
>WENV170160183
CEOK01122360
211884
Bacteroidota
TGC
Ala
>WENV170158789
CEOK01019316
57357
Bacteroidota
TGA
Ser
>WENV170158813
CEOK01020719
57357
Bacteroidota
TGA
Ser
>WENV170158858
CEOK01022913
57357
Bacteroidota
TGA
Ser
>WENV170159382
CEOK01060371
57357
Bacteroidota
TGA
Ser
>WENV170159518
CEOK01070263
57357
Bacteroidota
TGA
Ser
>WENV170159525
CEOK01071238
57357
Bacteroidota
TGA
Ser
>WENV170159608
CEOK01077498
57357
Bacteroidota
TGA
Ser
>WENV170159773
CEOK01089290
57357
Bacteroidota
TGA
Ser
>WENV170159840
CEOK01095680
57357
Bacteroidota
TGA
Ser
>WENV170160918
CEOK01183201
57357
Bacteroidota
TGA
Ser
>WENV170160380
CEOK01138883
160349
Bacteroidota
GTG
His
>WENV170160421
CEOK01142587
160349
Bacteroidota
GTG
His
>WENV170161452
CEOK01317141
456030
Bacteroidota
CCA
Trp
>WENV170159352
CEOK01058614
50342
Bacteroidota
TGA
Ser
>WENV170160351
CEOK01136464
385890
Bacteroidota
TTC
Glu
>WENV170160253
CEOK01128337
201198
Bacteroidota
TGT
Thr
>WENV170158477
CEOK01001543
263627
Bacteroidota
TTG
Gln
>WENV170158774
CEOK01018352
177164
Bacteroidota
GTC
Asp
>WENV170158911
CEOK01026749
177164
Bacteroidota
GTC
Asp
>WENV170159763
CEOK01088876
177164
Bacteroidota
GTC
Asp
>WENV170159770
CEOK01089105
177164
Bacteroidota
GTC
Asp
>WENV170159970
CEOK01106398
177164
Bacteroidota
GTC
Asp
>WENV170160458
CEOK01145775
177164
Bacteroidota
GTC
Asp
>WENV170160623
CEOK01163938
177164
Bacteroidota
GTC
Asp
>WENV170159371
CEOK01059647
138967
Bacteroidota
TGG
Pro
>WENV170159372
CEOK01059647
160570
Bacteroidota
TCT
Arg
>WENV170159894
CEOK01100123
188048
Bacteroidota
GGC
Ala
>WENV170159946
CEOK01104253
188048
Bacteroidota
GGC
Ala
>WENV170158747
CEOK01016378
119207
Bacteroidota
TAG
Leu
>WENV170159237
CEOK01050844
119207
Bacteroidota
TAG
Leu
>WENV170159112
CEOK01041881
144149
Bacteroidota
TGG
Pro
>WENV170159140
CEOK01044146
144149
Bacteroidota
TGG
Pro
>WENV170159160
CEOK01045298
144149
Bacteroidota
TGG
Pro
>WENV170159162
CEOK01045554
144149
Bacteroidota
TGG
Pro
>WENV170159283
CEOK01053795
144149
Bacteroidota
TGG
Pro
>WENV170159650
CEOK01080251
144149
Bacteroidota
TGG
Pro
>WENV170160423
CEOK01142681
144149
Bacteroidota
TGG
Pro
>WENV170160448
CEOK01144879
144149
Bacteroidota
TGG
Pro
>WENV170159551
CEOK01073659
263162
Bacteroidota
GGG
Pro
>WENV170158725
CEOK01015267
321470
Bacteroidota
GAA
Phe
>WENV170158873
CEOK01023776
321470
Bacteroidota
GAA
Phe
>WENV170159081
CEOK01038951
321470
Bacteroidota
GAA
Phe
>WENV170159099
CEOK01040157
321470
Bacteroidota
GAA
Phe
>WENV170159179
CEOK01046332
321470
Bacteroidota
GAA
Phe
>WENV170159326
CEOK01057027
321470
Bacteroidota
GAA
Phe
>WENV170159396
CEOK01061532
321470
Bacteroidota
GAA
Phe
>WENV170159954
CEOK01104769
321470
Bacteroidota
GAA
Phe
>WENV170160934
CEOK01184619
321470
Bacteroidota
GAA
Phe
>WENV170161075
CEOK01192491
307992
Bacteroidota
GAA
Phe
>WENV170158914
CEOK01026843
371968
Bacteroidota
CCT
Arg
>WENV170159013
CEOK01034456
71400
Bacteroidota
GCT
Ser
>WENV170161202
CEOK01198468
71400
Bacteroidota
GCT
Ser
>WENV170160018
CEOK01109944
263886
Bacteroidota
TTG
Gln
>WENV170160328
CEOK01134686
263886
Bacteroidota
TTG
Gln
>WENV170161121
CEOK01195395
263886
Bacteroidota
TTG
Gln
>WENV170158782
CEOK01018926
310118
Bacteroidota
CCA
Trp
>WENV170159918
CEOK01102121
310118
Bacteroidota
CCA
Trp
>WENV170160232
CEOK01126361
310118
Bacteroidota
CCA
Trp
>WENV170160758
CEOK01174127
310118
Bacteroidota
CCA
Trp
>WENV170160864
CEOK01179791
310118
Bacteroidota
CCA
Trp
>WENV170160968
CEOK01186167
310118
Bacteroidota
CCA
Trp
>WENV170159206
CEOK01049528
160456
Bacteroidota
GAT
Ile
>WENV170160015
CEOK01109849
188006
Bacteroidota
TCT
Arg
>WENV170159337
CEOK01057697
23145
Bacteroidota
GGA
Ser
>WENV170159034
CEOK01035650
18750
Bacteroidota
GGA
Ser
>WENV170160373
CEOK01138511
158985
Bacteroidota
GTC
Asp
>WENV170160370
CEOK01137982
301008
Bacteroidota
TTG
Gln
>WENV170160473
CEOK01148413
301008
Bacteroidota
TTG
Gln
>WENV170159573
CEOK01074998
68352
Bacteroidota
GCT
Ser
>WENV170160319
CEOK01133087
68352
Bacteroidota
GCT
Ser
>WENV170160412
CEOK01141689
390361
Bacteroidota
CCT
Arg
>WENV170158948
CEOK01028504
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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