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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170161226
CEOK01199150
323812
Cyanobacteriota
GGC
Ala
>WENV170159255
CEOK01051978
161770
Cyanobacteriota
TCT
Arg
>WENV170159938
CEOK01103699
161770
Cyanobacteriota
TCT
Arg
>WENV170159993
CEOK01107861
161770
Cyanobacteriota
TCT
Arg
>WENV170160117
CEOK01117783
161770
Cyanobacteriota
TCT
Arg
>WENV170161195
CEOK01198177
161770
Cyanobacteriota
TCT
Arg
>WENV170161691
CEOK01380346
370838
Cyanobacteriota
CCC
Gly
>WENV170158587
CEOK01008212
270573
Cyanobacteriota
GTG
His
>WENV170158973
CEOK01030526
12337
Cyanobacteriota
GCT
Ser
>WENV170160686
CEOK01169065
399462
Cyanobacteriota
GTT
Asn
>WENV170161072
CEOK01192443
369944
Cyanobacteriota
GAC
Val
>WENV170158897
CEOK01025959
260660
Cyanobacteriota
GTG
His
>WENV170160227
CEOK01125789
36294
Cyanobacteriota
GGA
Ser
>WENV170159012
CEOK01034137
448924
Cyanobacteriota
TCC
Gly
>WENV170160722
CEOK01171533
89069
Cyanobacteriota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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