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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170163287
CEOM01116680
91683
Alphaproteobacteria
CAA
Leu
>WENV170162304
CEOM01018714
396582
Alphaproteobacteria
GAC
Val
>WENV170163881
CEOM01183035
259585
Alphaproteobacteria
CCA
Trp
>WENV170162083
CEOM01000658
159552
Alphaproteobacteria
TGG
Pro
>WENV170163977
CEOM01192753
159552
Alphaproteobacteria
TGG
Pro
>WENV170162227
CEOM01012052
125595
Alphaproteobacteria
>WENV170164171
CEOM01204507
298571
Alphaproteobacteria
CTC
Glu
>WENV170163721
CEOM01168511
67450
Alphaproteobacteria
CAG
Leu
>WENV170163969
CEOM01192641
369743
Alphaproteobacteria
GAC
Val
>WENV170162309
CEOM01019187
166599
Alphaproteobacteria
CAT
Met
>WENV170163962
CEOM01192207
166599
Alphaproteobacteria
CAT
Met
>WENV170163316
CEOM01120171
377113
Alphaproteobacteria
GAC
Val
>WENV170163477
CEOM01135725
377113
Alphaproteobacteria
GAC
Val
>WENV170162787
CEOM01064597
26352
Alphaproteobacteria
GGA
Ser
>WENV170164123
CEOM01202196
371034
Alphaproteobacteria
GAC
Val
>WENV170164114
CEOM01201966
160254
Alphaproteobacteria
CCA
Trp
>WENV170163395
CEOM01127770
178940
Alphaproteobacteria
GGG
Pro
>WENV170163455
CEOM01133498
178940
Alphaproteobacteria
GGG
Pro
>WENV170162110
CEOM01003994
163875
Alphaproteobacteria
ACG
Arg
>WENV170163830
CEOM01178734
163875
Alphaproteobacteria
ACG
Arg
>WENV170162599
CEOM01044853
370677
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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