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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170163893
CEOM01184245
277731
Bacteroidota
>WENV170162561
CEOM01040566
18310
Bacteroidota
GGA
Ser
>WENV170162182
CEOM01009206
177853
Bacteroidota
GAT
Ile
>WENV170162197
CEOM01010349
177853
Bacteroidota
GAT
Ile
>WENV170162411
CEOM01027972
177853
Bacteroidota
GAT
Ile
>WENV170162550
CEOM01038822
177853
Bacteroidota
GAT
Ile
>WENV170162815
CEOM01066383
177853
Bacteroidota
GAT
Ile
>WENV170164503
CEOM01363806
108977
Bacteroidota
TAG
Leu
>WENV170164151
CEOM01203774
189987
Bacteroidota
TCT
Arg
>WENV170162257
CEOM01014592
266737
Bacteroidota
TTT
Lys
>WENV170162712
CEOM01056148
266737
Bacteroidota
TTT
Lys
>WENV170162942
CEOM01078921
266737
Bacteroidota
TTT
Lys
>WENV170163687
CEOM01164710
266737
Bacteroidota
TTT
Lys
>WENV170163701
CEOM01166161
266737
Bacteroidota
TTT
Lys
>WENV170162600
CEOM01044907
139505
Bacteroidota
TAC
Val
>WENV170162772
CEOM01063151
139505
Bacteroidota
TAC
Val
>WENV170163297
CEOM01118137
139505
Bacteroidota
TAC
Val
>WENV170164528
CEOM01369960
139505
Bacteroidota
TAC
Val
>WENV170162984
CEOM01083462
139133
Bacteroidota
GGG
Pro
>WENV170162789
CEOM01064710
51705
Bacteroidota
TGA
Ser
>WENV170162560
CEOM01040466
160349
Bacteroidota
GTG
His
>WENV170163550
CEOM01147418
160349
Bacteroidota
GTG
His
>WENV170162446
CEOM01031288
50342
Bacteroidota
TGA
Ser
>WENV170163194
CEOM01105535
268933
Bacteroidota
>WENV170162551
CEOM01038822
194726
Bacteroidota
TGC
Ala
>WENV170162904
CEOM01074707
194726
Bacteroidota
TGC
Ala
>WENV170163869
CEOM01182304
448855
Bacteroidota
GCA
Cys
>WENV170164062
CEOM01197702
291108
Bacteroidota
TTG
Gln
>WENV170162115
CEOM01004495
263627
Bacteroidota
TTG
Gln
>WENV170163188
CEOM01105142
138908
Bacteroidota
TGG
Pro
>WENV170162328
CEOM01020397
177164
Bacteroidota
GTC
Asp
>WENV170162425
CEOM01029331
177164
Bacteroidota
GTC
Asp
>WENV170163026
CEOM01086889
177164
Bacteroidota
GTC
Asp
>WENV170163219
CEOM01108962
177164
Bacteroidota
GTC
Asp
>WENV170164098
CEOM01201236
177164
Bacteroidota
GTC
Asp
>WENV170162589
CEOM01043664
143948
Bacteroidota
TGG
Pro
>WENV170163164
CEOM01102359
143948
Bacteroidota
TGG
Pro
>WENV170162207
CEOM01011010
188048
Bacteroidota
GGC
Ala
>WENV170162963
CEOM01081312
164620
Bacteroidota
GTG
His
>WENV170162504
CEOM01036541
144149
Bacteroidota
TGG
Pro
>WENV170162510
CEOM01036748
144149
Bacteroidota
TGG
Pro
>WENV170162612
CEOM01046275
144149
Bacteroidota
TGG
Pro
>WENV170162891
CEOM01074038
144149
Bacteroidota
TGG
Pro
>WENV170162138
CEOM01005705
265540
Bacteroidota
GAA
Phe
>WENV170162259
CEOM01014594
265540
Bacteroidota
GAA
Phe
>WENV170162423
CEOM01029189
265540
Bacteroidota
GAA
Phe
>WENV170162799
CEOM01065291
265540
Bacteroidota
GAA
Phe
>WENV170162925
CEOM01076632
265540
Bacteroidota
GAA
Phe
>WENV170163311
CEOM01119401
371968
Bacteroidota
CCT
Arg
>WENV170162725
CEOM01057525
71400
Bacteroidota
GCT
Ser
>WENV170164084
CEOM01200094
71400
Bacteroidota
GCT
Ser
>WENV170162351
CEOM01022684
168483
Bacteroidota
GTT
Asn
>WENV170162369
CEOM01024818
168483
Bacteroidota
GTT
Asn
>WENV170162445
CEOM01031181
168483
Bacteroidota
GTT
Asn
>WENV170162872
CEOM01071311
168483
Bacteroidota
GTT
Asn
>WENV170163143
CEOM01099801
168483
Bacteroidota
GTT
Asn
>WENV170163556
CEOM01147748
168483
Bacteroidota
GTT
Asn
>WENV170162732
CEOM01058292
263886
Bacteroidota
TTG
Gln
>WENV170162855
CEOM01069890
263886
Bacteroidota
TTG
Gln
>WENV170163051
CEOM01089295
263886
Bacteroidota
TTG
Gln
>WENV170163177
CEOM01104117
263886
Bacteroidota
TTG
Gln
>WENV170163503
CEOM01139192
263886
Bacteroidota
TTG
Gln
>WENV170163771
CEOM01173431
263886
Bacteroidota
TTG
Gln
>WENV170162621
CEOM01046908
106261
Bacteroidota
TAG
Leu
>WENV170163413
CEOM01129714
106261
Bacteroidota
TAG
Leu
>WENV170162462
CEOM01033194
188006
Bacteroidota
TCT
Arg
>WENV170162609
CEOM01045844
174954
Bacteroidota
GTT
Asn
>WENV170162639
CEOM01048278
174954
Bacteroidota
GTT
Asn
>WENV170162484
CEOM01035064
18750
Bacteroidota
GGA
Ser
>WENV170162930
CEOM01077710
18750
Bacteroidota
GGA
Ser
>WENV170162167
CEOM01007748
19592
Bacteroidota
GGA
Ser
>WENV170162836
CEOM01068295
19592
Bacteroidota
GGA
Ser
>WENV170164025
CEOM01195729
19592
Bacteroidota
GGA
Ser
>WENV170163221
CEOM01109365
139231
Bacteroidota
GAC
Val
>WENV170163375
CEOM01125536
139231
Bacteroidota
GAC
Val
>WENV170164060
CEOM01197515
139231
Bacteroidota
GAC
Val
>WENV170164467
CEOM01349456
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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