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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162359
CEOM01023891
161768
Cyanobacteriota
CCG
Arg
>WENV170162455
CEOM01032303
160110
Cyanobacteriota
CCG
Arg
>WENV170162338
CEOM01021423
161770
Cyanobacteriota
TCT
Arg
>WENV170162594
CEOM01043999
161770
Cyanobacteriota
TCT
Arg
>WENV170162866
CEOM01070445
161770
Cyanobacteriota
TCT
Arg
>WENV170163170
CEOM01103287
161770
Cyanobacteriota
TCT
Arg
>WENV170163176
CEOM01104105
161770
Cyanobacteriota
TCT
Arg
>WENV170163405
CEOM01129079
161770
Cyanobacteriota
TCT
Arg
>WENV170163505
CEOM01139566
161770
Cyanobacteriota
TCT
Arg
>WENV170163510
CEOM01140396
161770
Cyanobacteriota
TCT
Arg
>WENV170163525
CEOM01142697
161770
Cyanobacteriota
TCT
Arg
>WENV170163774
CEOM01173564
161770
Cyanobacteriota
TCT
Arg
>WENV170163823
CEOM01178341
161770
Cyanobacteriota
TCT
Arg
>WENV170164083
CEOM01200048
161770
Cyanobacteriota
TCT
Arg
>WENV170164155
CEOM01204060
161770
Cyanobacteriota
TCT
Arg
>WENV170164233
CEOM01206982
161770
Cyanobacteriota
TCT
Arg
>WENV170163469
CEOM01135236
370838
Cyanobacteriota
CCC
Gly
>WENV170162150
CEOM01006497
89063
Cyanobacteriota
TAG
Leu
>WENV170162514
CEOM01036817
161711
Cyanobacteriota
GTC
Asp
>WENV170163920
CEOM01187996
182044
Cyanobacteriota
GTC
Asp
>WENV170163355
CEOM01122750
391767
Cyanobacteriota
TAC
Val
>WENV170163519
CEOM01141500
391767
Cyanobacteriota
TAC
Val
>WENV170162513
CEOM01036817
258993
Cyanobacteriota
CCA
Trp
>WENV170164040
CEOM01196203
258996
Cyanobacteriota
GTG
His
>WENV170162397
CEOM01026654
370891
Cyanobacteriota
CGT
Thr
>WENV170163678
CEOM01163581
161838
Cyanobacteriota
GGG
Pro
>WENV170163321
CEOM01120542
369944
Cyanobacteriota
GAC
Val
>WENV170162457
CEOM01032642
260660
Cyanobacteriota
GTG
His
>WENV170162846
CEOM01069305
177652
Cyanobacteriota
GGG
Pro
>WENV170162298
CEOM01018029
26564
Cyanobacteriota
TGA
Ser
>WENV170163272
CEOM01115816
298990
Cyanobacteriota
CCA
Trp
>WENV170163686
CEOM01164700
260659
Cyanobacteriota
GGC
Ala
>WENV170163541
CEOM01145705
174795
Cyanobacteriota
CCG
Arg
>WENV170162582
CEOM01043248
370922
Cyanobacteriota
GAC
Val
>WENV170162640
CEOM01048379
65386
Cyanobacteriota
CAG
Leu
>WENV170164283
CEOM01228509
370924
Cyanobacteriota
CCC
Gly
>WENV170164538
CEOM01374193
161765
Cyanobacteriota
CAT
Met
>WENV170163460
CEOM01134012
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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