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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170173532
CEOQ01220857
369984
Alphaproteobacteria
TTG
Gln
>WENV170171345
CEOQ01050719
448544
Alphaproteobacteria
CTG
Gln
>WENV170173626
CEOQ01229048
396582
Alphaproteobacteria
GAC
Val
>WENV170170735
CEOQ01021009
268994
Alphaproteobacteria
CCA
Trp
>WENV170174911
CEOQ01370494
160201
Alphaproteobacteria
TGG
Pro
>WENV170170663
CEOQ01015671
166628
Alphaproteobacteria
CAT
Met
>WENV170173346
CEOQ01201217
259585
Alphaproteobacteria
CCA
Trp
>WENV170170943
CEOQ01031824
125394
Alphaproteobacteria
CAA
Leu
>WENV170172848
CEOQ01154233
31820
Alphaproteobacteria
TGA
Ser
>WENV170171829
CEOQ01076896
383286
Alphaproteobacteria
GGT
Thr
>WENV170171828
CEOQ01076895
448545
Alphaproteobacteria
>WENV170173024
CEOQ01171528
448545
Alphaproteobacteria
>WENV170172216
CEOQ01103178
462157
Alphaproteobacteria
TCC
Gly
>WENV170172475
CEOQ01122412
203353
Alphaproteobacteria
CAT
Met
>WENV170173589
CEOQ01224908
220291
Alphaproteobacteria
CCG
Arg
>WENV170171539
CEOQ01061305
325069
Alphaproteobacteria
TTT
Lys
>WENV170173050
CEOQ01174416
325069
Alphaproteobacteria
TTT
Lys
>WENV170170440
CEOQ01003423
238723
Alphaproteobacteria
GTG
His
>WENV170170748
CEOQ01021828
238723
Alphaproteobacteria
GTG
His
>WENV170173540
CEOQ01221321
107394
Alphaproteobacteria
CAA
Leu
>WENV170170452
CEOQ01003758
170008
Alphaproteobacteria
GGG
Pro
>WENV170170522
CEOQ01008405
382308
Alphaproteobacteria
GAA
Phe
>WENV170173088
CEOQ01177969
309182
Alphaproteobacteria
TAC
Val
>WENV170174173
CEOQ01273498
307687
Alphaproteobacteria
GGC
Ala
>WENV170170896
CEOQ01029353
185863
Alphaproteobacteria
>WENV170173262
CEOQ01193434
32718
Alphaproteobacteria
TGA
Ser
>WENV170173040
CEOQ01173703
302408
Alphaproteobacteria
GAA
Phe
>WENV170174782
CEOQ01300646
162126
Alphaproteobacteria
CCG
Arg
>WENV170171538
CEOQ01061302
65064
Alphaproteobacteria
GAG
Leu
>WENV170174186
CEOQ01274392
11962
Alphaproteobacteria
GCT
Ser
>WENV170172678
CEOQ01138491
163875
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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