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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170171003
CEOQ01035213
400868
Cyanobacteriota
TTG
Gln
>WENV170171395
CEOQ01053185
400868
Cyanobacteriota
TTG
Gln
>WENV170172190
CEOQ01100650
400868
Cyanobacteriota
TTG
Gln
>WENV170172767
CEOQ01145795
400868
Cyanobacteriota
TTG
Gln
>WENV170172575
CEOQ01130009
161711
Cyanobacteriota
GTC
Asp
>WENV170173841
CEOQ01248895
277264
Cyanobacteriota
CGC
Ala
>WENV170172460
CEOQ01121228
258996
Cyanobacteriota
GTG
His
>WENV170173511
CEOQ01218609
258996
Cyanobacteriota
GTG
His
>WENV170174840
CEOQ01340975
161838
Cyanobacteriota
GGG
Pro
>WENV170170523
CEOQ01008422
369944
Cyanobacteriota
GAC
Val
>WENV170173506
CEOQ01218194
370893
Cyanobacteriota
CGT
Thr
>WENV170174316
CEOQ01284836
41374
Cyanobacteriota
TAA
Leu
>WENV170172371
CEOQ01112693
370924
Cyanobacteriota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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