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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170170512
CEOQ01007456
158433
Gammaproteobacteria
ACG
Arg
>WENV170174151
CEOQ01271947
174334
Gammaproteobacteria
>WENV170173389
CEOQ01206580
475111
Gammaproteobacteria
TCC
Gly
>WENV170173084
CEOQ01177633
261853
Gammaproteobacteria
GTT
Asn
>WENV170171132
CEOQ01040815
263230
Gammaproteobacteria
TTT
Lys
>WENV170171133
CEOQ01040815
263230
Gammaproteobacteria
TTT
Lys
>WENV170173921
CEOQ01254127
448854
Gammaproteobacteria
CCC
Gly
>WENV170171886
CEOQ01080537
319314
Gammaproteobacteria
TGT
Thr
>WENV170170503
CEOQ01006940
230238
Gammaproteobacteria
TGG
Pro
>WENV170172796
CEOQ01149254
231877
Gammaproteobacteria
GAT
Ile
>WENV170174823
CEOQ01329034
221435
Gammaproteobacteria
GGG
Pro
>WENV170170605
CEOQ01012881
213269
Gammaproteobacteria
GAT
Ile
>WENV170170918
CEOQ01030336
21308
Gammaproteobacteria
GGA
Ser
>WENV170174514
CEOQ01294906
105723
Gammaproteobacteria
GAG
Leu
>WENV170173798
CEOQ01244329
52193
Gammaproteobacteria
GGA
Ser
>WENV170173872
CEOQ01250641
271191
Gammaproteobacteria
CCA
Trp
>WENV170171700
CEOQ01070669
229608
Gammaproteobacteria
CAT
Met
>WENV170173230
CEOQ01190524
169553
Gammaproteobacteria
ACG
Arg
>WENV170172435
CEOQ01119139
68919
Gammaproteobacteria
CAG
Leu
>WENV170174388
CEOQ01288430
272540
Gammaproteobacteria
GTT
Asn
>WENV170173157
CEOQ01185058
198774
Gammaproteobacteria
GGG
Pro
>WENV170173388
CEOQ01206580
128911
Gammaproteobacteria
GTA
Tyr
>WENV170172046
CEOQ01089927
323307
Gammaproteobacteria
GGT
Thr
>WENV170171982
CEOQ01085625
226531
Gammaproteobacteria
CGG
Pro
>WENV170174548
CEOQ01296224
226531
Gammaproteobacteria
CGG
Pro
>WENV170172954
CEOQ01164203
21486
Gammaproteobacteria
TGA
Ser
>WENV170174319
CEOQ01284945
161939
Gammaproteobacteria
GAC
Val
>WENV170172489
CEOQ01123377
171686
Gammaproteobacteria
CGG
Pro
>WENV170175319
CEOQ01513007
306475
Gammaproteobacteria
GTG
His
>WENV170170458
CEOQ01003896
471753
Gammaproteobacteria
GCA
Cys
>WENV170171821
CEOQ01076296
191341
Gammaproteobacteria
CAT
Met
>WENV170172045
CEOQ01089927
105812
Gammaproteobacteria
GTA
Tyr
>WENV170172571
CEOQ01129991
105812
Gammaproteobacteria
GTA
Tyr
>WENV170173430
CEOQ01210884
462237
Gammaproteobacteria
GCA
Cys
>WENV170174008
CEOQ01262051
307388
Gammaproteobacteria
GCC
Gly
>WENV170170697
CEOQ01018365
479393
Gammaproteobacteria
GCA
Cys
>WENV170172232
CEOQ01104050
479393
Gammaproteobacteria
GCA
Cys
>WENV170173390
CEOQ01206580
282566
Gammaproteobacteria
GGT
Thr
>WENV170172349
CEOQ01110740
265381
Gammaproteobacteria
GTT
Asn
>WENV170170510
CEOQ01007411
90637
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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