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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170176200
CEOS01050201
26222
Actinomycetota
CGA
Ser
>WENV170176670
CEOS01108374
26222
Actinomycetota
CGA
Ser
>WENV170176746
CEOS01118812
291151
Actinomycetota
CTT
Lys
>WENV170175973
CEOS01024379
159488
Actinomycetota
>WENV170176781
CEOS01122556
407982
Actinomycetota
CCT
Arg
>WENV170176821
CEOS01127651
407982
Actinomycetota
CCT
Arg
>WENV170176381
CEOS01070372
81767
Actinomycetota
>WENV170176096
CEOS01038350
258812
Actinomycetota
CCA
Trp
>WENV170176305
CEOS01060912
258145
Actinomycetota
GTT
Asn
>WENV170177020
CEOS01148969
79011
Actinomycetota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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