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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175957
CEOS01022611
328287
Alphaproteobacteria
TGC
Ala
>WENV170175739
CEOS01002533
202065
Alphaproteobacteria
CCT
Arg
>WENV170176124
CEOS01042059
202065
Alphaproteobacteria
CCT
Arg
>WENV170176158
CEOS01046586
202065
Alphaproteobacteria
CCT
Arg
>WENV170176506
CEOS01085597
111257
Alphaproteobacteria
TAA
Leu
>WENV170177035
CEOS01154183
160802
Alphaproteobacteria
TGG
Pro
>WENV170175726
CEOS01001500
202800
Alphaproteobacteria
ACG
Arg
>WENV170176609
CEOS01099623
202800
Alphaproteobacteria
ACG
Arg
>WENV170176317
CEOS01062552
236864
Alphaproteobacteria
CCT
Arg
>WENV170176490
CEOS01083860
369984
Alphaproteobacteria
TTG
Gln
>WENV170176025
CEOS01029846
370165
Alphaproteobacteria
TTC
Glu
>WENV170176898
CEOS01137068
214179
Alphaproteobacteria
CCT
Arg
>WENV170175852
CEOS01013939
313530
Alphaproteobacteria
CGC
Ala
>WENV170176079
CEOS01036333
122389
Alphaproteobacteria
TAG
Leu
>WENV170176106
CEOS01039383
448544
Alphaproteobacteria
CTG
Gln
>WENV170176196
CEOS01049911
448544
Alphaproteobacteria
CTG
Gln
>WENV170176357
CEOS01067716
448544
Alphaproteobacteria
CTG
Gln
>WENV170176972
CEOS01143178
448544
Alphaproteobacteria
CTG
Gln
>WENV170176075
CEOS01036002
160319
Alphaproteobacteria
TCT
Arg
>WENV170176105
CEOS01039265
32141
Alphaproteobacteria
TGA
Ser
>WENV170176605
CEOS01099020
175228
Alphaproteobacteria
CAT
Met
>WENV170176247
CEOS01055000
448621
Alphaproteobacteria
GCA
Cys
>WENV170175752
CEOS01004330
375674
Alphaproteobacteria
TTC
Glu
>WENV170177040
CEOS01157123
448412
Alphaproteobacteria
CTG
Gln
>WENV170176593
CEOS01097085
271173
Alphaproteobacteria
TTT
Lys
>WENV170176171
CEOS01047878
448084
Alphaproteobacteria
GCA
Cys
>WENV170176491
CEOS01084146
290990
Alphaproteobacteria
TGT
Thr
>WENV170176795
CEOS01123988
26119
Alphaproteobacteria
CGA
Ser
>WENV170177011
CEOS01145884
26119
Alphaproteobacteria
CGA
Ser
>WENV170175809
CEOS01009496
383286
Alphaproteobacteria
GGT
Thr
>WENV170176349
CEOS01066841
448545
Alphaproteobacteria
>WENV170176552
CEOS01092037
448545
Alphaproteobacteria
>WENV170176978
CEOS01143546
27939
Alphaproteobacteria
GGA
Ser
>WENV170176422
CEOS01074387
402609
Alphaproteobacteria
GAA
Phe
>WENV170175981
CEOS01025484
158951
Alphaproteobacteria
GTG
His
>WENV170176747
CEOS01119514
27583
Alphaproteobacteria
CGA
Ser
>WENV170176651
CEOS01105433
259213
Alphaproteobacteria
GGC
Ala
>WENV170175718
CEOS01000961
237578
Alphaproteobacteria
GAT
Ile
>WENV170176743
CEOS01118264
169670
Alphaproteobacteria
ACG
Arg
>WENV170176662
CEOS01107413
395582
Alphaproteobacteria
CTC
Glu
>WENV170176689
CEOS01112454
278841
Alphaproteobacteria
TTT
Lys
>WENV170177007
CEOS01145488
278841
Alphaproteobacteria
TTT
Lys
>WENV170176682
CEOS01111155
475646
Alphaproteobacteria
CCC
Gly
>WENV170175996
CEOS01026985
160502
Alphaproteobacteria
GAT
Ile
>WENV170176017
CEOS01028799
377113
Alphaproteobacteria
GAC
Val
>WENV170176264
CEOS01056033
382630
Alphaproteobacteria
GAC
Val
>WENV170176287
CEOS01057481
382630
Alphaproteobacteria
GAC
Val
>WENV170176297
CEOS01059093
148592
Alphaproteobacteria
GGG
Pro
>WENV170175870
CEOS01015804
124578
Alphaproteobacteria
CAA
Leu
>WENV170176539
CEOS01090441
161060
Alphaproteobacteria
ACG
Arg
>WENV170176195
CEOS01049883
275145
Alphaproteobacteria
TGT
Thr
>WENV170176603
CEOS01098843
312060
Alphaproteobacteria
CGT
Thr
>WENV170176146
CEOS01045626
107394
Alphaproteobacteria
CAA
Leu
>WENV170175917
CEOS01018748
170008
Alphaproteobacteria
GGG
Pro
>WENV170176775
CEOS01121840
170008
Alphaproteobacteria
GGG
Pro
>WENV170176877
CEOS01133766
170008
Alphaproteobacteria
GGG
Pro
>WENV170175874
CEOS01015859
382308
Alphaproteobacteria
GAA
Phe
>WENV170176505
CEOS01085363
382308
Alphaproteobacteria
GAA
Phe
>WENV170177246
CEOS01231797
391624
Alphaproteobacteria
TTG
Gln
>WENV170176587
CEOS01096504
309182
Alphaproteobacteria
TAC
Val
>WENV170175766
CEOS01005205
260557
Alphaproteobacteria
CGC
Ala
>WENV170175833
CEOS01012398
185863
Alphaproteobacteria
>WENV170175959
CEOS01022825
185863
Alphaproteobacteria
>WENV170176758
CEOS01120533
161303
Alphaproteobacteria
TCT
Arg
>WENV170175770
CEOS01005799
169247
Alphaproteobacteria
CCT
Arg
>WENV170176074
CEOS01035853
169247
Alphaproteobacteria
CCT
Arg
>WENV170176633
CEOS01102316
65064
Alphaproteobacteria
GAG
Leu
>WENV170177009
CEOS01145635
262836
Alphaproteobacteria
TAC
Val
>WENV170176011
CEOS01028412
259212
Alphaproteobacteria
TGT
Thr
>WENV170176868
CEOS01133502
11978
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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