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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170177100
CEOS01183134
370833
Bacteroidota
TTG
Gln
>WENV170176942
CEOS01140406
260563
Bacteroidota
>WENV170176959
CEOS01142145
105453
Bacteroidota
TAG
Leu
>WENV170176144
CEOS01045264
370082
Bacteroidota
GGT
Thr
>WENV170176529
CEOS01088971
314601
Bacteroidota
>WENV170176675
CEOS01109784
116954
Bacteroidota
TAG
Leu
>WENV170176732
CEOS01117168
391422
Bacteroidota
CCT
Arg
>WENV170176799
CEOS01124106
169559
Bacteroidota
GGG
Pro
>WENV170176109
CEOS01039782
160349
Bacteroidota
GTG
His
>WENV170176479
CEOS01082493
160351
Bacteroidota
TCT
Arg
>WENV170177025
CEOS01149882
197698
Bacteroidota
>WENV170176642
CEOS01103958
170035
Bacteroidota
GTT
Asn
>WENV170176899
CEOS01137071
170035
Bacteroidota
GTT
Asn
>WENV170177170
CEOS01211720
448855
Bacteroidota
GCA
Cys
>WENV170176801
CEOS01125036
300647
Bacteroidota
TTT
Lys
>WENV170177244
CEOS01231489
65365
Bacteroidota
GCT
Ser
>WENV170176373
CEOS01069956
177164
Bacteroidota
GTC
Asp
>WENV170176611
CEOS01099642
171098
Bacteroidota
>WENV170176579
CEOS01095985
139057
Bacteroidota
GAC
Val
>WENV170175769
CEOS01005614
257687
Bacteroidota
TTT
Lys
>WENV170177240
CEOS01231082
263162
Bacteroidota
GGG
Pro
>WENV170176885
CEOS01135259
158981
Bacteroidota
GGC
Ala
>WENV170175992
CEOS01026650
454104
Bacteroidota
GCA
Cys
>WENV170177263
CEOS01233192
328225
Bacteroidota
GAA
Phe
>WENV170175942
CEOS01021078
71400
Bacteroidota
GCT
Ser
>WENV170175916
CEOS01018711
24600
Bacteroidota
GGA
Ser
>WENV170176879
CEOS01134130
210921
Bacteroidota
GGC
Ala
>WENV170176660
CEOS01107198
263886
Bacteroidota
TTG
Gln
>WENV170176214
CEOS01051788
158980
Bacteroidota
TCT
Arg
>WENV170176408
CEOS01072582
23145
Bacteroidota
GGA
Ser
>WENV170176937
CEOS01140090
111503
Bacteroidota
CAA
Leu
>WENV170176961
CEOS01142454
111503
Bacteroidota
CAA
Leu
>WENV170175929
CEOS01020083
158985
Bacteroidota
GTC
Asp
>WENV170176672
CEOS01108697
325477
Bacteroidota
TTG
Gln
>WENV170176895
CEOS01136952
325477
Bacteroidota
TTG
Gln
>WENV170176994
CEOS01144939
325477
Bacteroidota
TTG
Gln
>WENV170176627
CEOS01101529
259964
Bacteroidota
>WENV170176012
CEOS01028494
89123
Bacteroidota
GCT
Ser
>WENV170176022
CEOS01029416
89123
Bacteroidota
GCT
Ser
>WENV170176752
CEOS01120102
160572
Bacteroidota
GGG
Pro
>WENV170177210
CEOS01223540
160572
Bacteroidota
GGG
Pro
>WENV170176277
CEOS01056951
169560
Bacteroidota
GTG
His
>WENV170176378
CEOS01070181
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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