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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170178846
CEOV01088509
396582
Alphaproteobacteria
GAC
Val
>WENV170178887
CEOV01093852
212253
Alphaproteobacteria
>WENV170178633
CEOV01066232
159552
Alphaproteobacteria
TGG
Pro
>WENV170178246
CEOV01023377
448267
Alphaproteobacteria
GCA
Cys
>WENV170178180
CEOV01016891
32122
Alphaproteobacteria
GCT
Ser
>WENV170178711
CEOV01073436
406362
Alphaproteobacteria
GAA
Phe
>WENV170178250
CEOV01023983
203353
Alphaproteobacteria
CAT
Met
>WENV170178413
CEOV01039899
377113
Alphaproteobacteria
GAC
Val
>WENV170178252
CEOV01024180
371034
Alphaproteobacteria
GAC
Val
>WENV170178142
CEOV01012932
163875
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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