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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170179011
CEOV01109844
277731
Bacteroidota
>WENV170179030
CEOV01111431
139500
Bacteroidota
TGG
Pro
>WENV170179281
CEOV01130699
168260
Bacteroidota
GTT
Asn
>WENV170178535
CEOV01053581
220163
Bacteroidota
TCT
Arg
>WENV170178656
CEOV01068040
57357
Bacteroidota
TGA
Ser
>WENV170178950
CEOV01103046
57357
Bacteroidota
TGA
Ser
>WENV170179012
CEOV01109855
50342
Bacteroidota
TGA
Ser
>WENV170179567
CEOV01241192
263627
Bacteroidota
TTG
Gln
>WENV170178382
CEOV01036357
119207
Bacteroidota
TAG
Leu
>WENV170178665
CEOV01068994
119207
Bacteroidota
TAG
Leu
>WENV170178090
CEOV01008047
321470
Bacteroidota
GAA
Phe
>WENV170178775
CEOV01080321
172034
Bacteroidota
TGT
Thr
>WENV170178331
CEOV01032272
168483
Bacteroidota
GTT
Asn
>WENV170178853
CEOV01089899
168483
Bacteroidota
GTT
Asn
>WENV170178874
CEOV01092121
168483
Bacteroidota
GTT
Asn
>WENV170178791
CEOV01081971
310118
Bacteroidota
CCA
Trp
>WENV170178037
CEOV01003807
160456
Bacteroidota
GAT
Ile
>WENV170178042
CEOV01004281
18750
Bacteroidota
GGA
Ser
>WENV170178981
CEOV01106183
311172
Bacteroidota
GAA
Phe
>WENV170178677
CEOV01070515
259964
Bacteroidota
>WENV170179060
CEOV01116353
259964
Bacteroidota
>WENV170179197
CEOV01126762
301008
Bacteroidota
TTG
Gln
>WENV170178831
CEOV01086764
68352
Bacteroidota
GCT
Ser
>WENV170179046
CEOV01114742
68352
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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