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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170179305
CEOV01144557
261853
Gammaproteobacteria
GTT
Asn
>WENV170178494
CEOV01048820
451853
Gammaproteobacteria
GCA
Cys
>WENV170179205
CEOV01127361
451853
Gammaproteobacteria
GCA
Cys
>WENV170178709
CEOV01073069
325641
Gammaproteobacteria
CCA
Trp
>WENV170179094
CEOV01118956
164285
Gammaproteobacteria
TCG
Arg
>WENV170178684
CEOV01070749
259140
Gammaproteobacteria
TGC
Ala
>WENV170178197
CEOV01018509
471753
Gammaproteobacteria
GCA
Cys
>WENV170178147
CEOV01014391
105812
Gammaproteobacteria
GTA
Tyr
>WENV170178882
CEOV01093166
105812
Gammaproteobacteria
GTA
Tyr
>WENV170178239
CEOV01022785
265381
Gammaproteobacteria
GTT
Asn
>WENV170178525
CEOV01052077
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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