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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170181898
CEOX01051754
139505
Bacteroidota
TAC
Val
>WENV170181668
CEOX01027072
177164
Bacteroidota
GTC
Asp
>WENV170181845
CEOX01046871
177164
Bacteroidota
GTC
Asp
>WENV170181477
CEOX01008235
119207
Bacteroidota
TAG
Leu
>WENV170181869
CEOX01049852
119207
Bacteroidota
TAG
Leu
>WENV170181897
CEOX01051592
321470
Bacteroidota
GAA
Phe
>WENV170182585
CEOX01227114
158981
Bacteroidota
GGC
Ala
>WENV170182236
CEOX01115307
152195
Bacteroidota
TAC
Val
>WENV170181621
CEOX01022002
310118
Bacteroidota
CCA
Trp
>WENV170181941
CEOX01055068
310118
Bacteroidota
CCA
Trp
>WENV170182204
CEOX01099834
23145
Bacteroidota
GGA
Ser
>WENV170181562
CEOX01015884
301008
Bacteroidota
TTG
Gln
>WENV170181611
CEOX01020875
301008
Bacteroidota
TTG
Gln
>WENV170181892
CEOX01051143
301008
Bacteroidota
TTG
Gln
>WENV170182098
CEOX01066772
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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