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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170182314
CEOX01150980
256881
Gammaproteobacteria
GTG
His
>WENV170181821
CEOX01043085
195797
Gammaproteobacteria
ACG
Arg
>WENV170182394
CEOX01180515
221435
Gammaproteobacteria
GGG
Pro
>WENV170182544
CEOX01220503
164285
Gammaproteobacteria
TCG
Arg
>WENV170181610
CEOX01020792
263086
Gammaproteobacteria
GTT
Asn
>WENV170182315
CEOX01150980
106574
Gammaproteobacteria
TAG
Leu
>WENV170181760
CEOX01037014
259140
Gammaproteobacteria
TGC
Ala
>WENV170181807
CEOX01041076
105812
Gammaproteobacteria
GTA
Tyr
>WENV170181909
CEOX01052634
105812
Gammaproteobacteria
GTA
Tyr
>WENV170181394
CEOX01001802
261154
Gammaproteobacteria
TGC
Ala
>WENV170181513
CEOX01011182
265381
Gammaproteobacteria
GTT
Asn
>WENV170181751
CEOX01036222
236600
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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