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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170189055
CEPB01114881
112649
Alphaproteobacteria
TAG
Leu
>WENV170188319
CEPB01031126
396582
Alphaproteobacteria
GAC
Val
>WENV170189404
CEPB01210124
396582
Alphaproteobacteria
GAC
Val
>WENV170188335
CEPB01032633
159552
Alphaproteobacteria
TGG
Pro
>WENV170188110
CEPB01015452
31820
Alphaproteobacteria
TGA
Ser
>WENV170188875
CEPB01096755
263684
Alphaproteobacteria
TTT
Lys
>WENV170188002
CEPB01008307
278841
Alphaproteobacteria
TTT
Lys
>WENV170188048
CEPB01011758
278841
Alphaproteobacteria
TTT
Lys
>WENV170188157
CEPB01020249
278841
Alphaproteobacteria
TTT
Lys
>WENV170188654
CEPB01066543
374019
Alphaproteobacteria
GAC
Val
>WENV170188627
CEPB01063380
377113
Alphaproteobacteria
GAC
Val
>WENV170188616
CEPB01061423
451387
Alphaproteobacteria
TCC
Gly
>WENV170188528
CEPB01050446
371034
Alphaproteobacteria
GAC
Val
>WENV170188247
CEPB01026856
160254
Alphaproteobacteria
CCA
Trp
>WENV170188459
CEPB01043809
178940
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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