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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170189057
CEPB01115674
139505
Bacteroidota
TAC
Val
>WENV170189051
CEPB01114528
449969
Bacteroidota
GCA
Cys
>WENV170188006
CEPB01008696
385890
Bacteroidota
TTC
Glu
>WENV170188685
CEPB01070420
194726
Bacteroidota
TGC
Ala
>WENV170188046
CEPB01011493
263627
Bacteroidota
TTG
Gln
>WENV170188019
CEPB01009390
49783
Bacteroidota
TGA
Ser
>WENV170188907
CEPB01100029
263162
Bacteroidota
GGG
Pro
>WENV170188770
CEPB01080947
168483
Bacteroidota
GTT
Asn
>WENV170188601
CEPB01059896
106261
Bacteroidota
TAG
Leu
>WENV170188071
CEPB01012956
18750
Bacteroidota
GGA
Ser
>WENV170188568
CEPB01055919
18750
Bacteroidota
GGA
Ser
>WENV170188913
CEPB01100620
18750
Bacteroidota
GGA
Ser
>WENV170188004
CEPB01008459
158985
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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