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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170188772
CEPB01081256
160110
Cyanobacteriota
CCG
Arg
>WENV170188959
CEPB01104514
160110
Cyanobacteriota
CCG
Arg
>WENV170188563
CEPB01055137
265805
Cyanobacteriota
>WENV170188348
CEPB01033693
185932
Cyanobacteriota
GTC
Asp
>WENV170188452
CEPB01043216
391767
Cyanobacteriota
TAC
Val
>WENV170188477
CEPB01045727
391767
Cyanobacteriota
TAC
Val
>WENV170187928
CEPB01001367
258993
Cyanobacteriota
CCA
Trp
>WENV170187948
CEPB01003455
258993
Cyanobacteriota
CCA
Trp
>WENV170189084
CEPB01119184
369944
Cyanobacteriota
GAC
Val
>WENV170188201
CEPB01023116
28527
Cyanobacteriota
CGA
Ser
>WENV170188735
CEPB01077634
41285
Cyanobacteriota
TAA
Leu
>WENV170189189
CEPB01126769
369938
Cyanobacteriota
GTT
Asn
>WENV170187939
CEPB01002596
65045
Cyanobacteriota
CAG
Leu
>WENV170188128
CEPB01017507
65386
Cyanobacteriota
CAG
Leu
>WENV170188956
CEPB01104218
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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