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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170189442
CEPB01218347
261853
Gammaproteobacteria
GTT
Asn
>WENV170187954
CEPB01003713
65736
Gammaproteobacteria
TAA
Leu
>WENV170188780
CEPB01082624
65736
Gammaproteobacteria
TAA
Leu
>WENV170189041
CEPB01114102
65736
Gammaproteobacteria
TAA
Leu
>WENV170189077
CEPB01118244
65736
Gammaproteobacteria
TAA
Leu
>WENV170188821
CEPB01087603
451853
Gammaproteobacteria
GCA
Cys
>WENV170189079
CEPB01118362
263086
Gammaproteobacteria
GTT
Asn
>WENV170188979
CEPB01107174
195820
Gammaproteobacteria
GTG
His
>WENV170189156
CEPB01125409
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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