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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193750
CEPI01011905
210855
Gammaproteobacteria
ACG
Arg
>WENV170193676
CEPI01001079
19344
Gammaproteobacteria
GGA
Ser
>WENV170193671
CEPI01000962
325641
Gammaproteobacteria
CCA
Trp
>WENV170193948
CEPI01076153
271667
Gammaproteobacteria
TTT
Lys
>WENV170193751
CEPI01011994
67636
Gammaproteobacteria
CAG
Leu
>WENV170193675
CEPI01001031
172146
Gammaproteobacteria
GGG
Pro
>WENV170193759
CEPI01012023
271670
Gammaproteobacteria
GGT
Thr
>WENV170193836
CEPI01046342
271668
Gammaproteobacteria
TGT
Thr
>WENV170193673
CEPI01001031
265381
Gammaproteobacteria
GTT
Asn
>WENV170193681
CEPI01001803
410254
Gammaproteobacteria
TTG
Gln
>WENV170193737
CEPI01010376
271669
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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