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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170195152
CEPJ01105553
105499
Alphaproteobacteria
TAG
Leu
>WENV170195529
CEPJ01141629
396582
Alphaproteobacteria
GAC
Val
>WENV170194619
CEPJ01048926
159552
Alphaproteobacteria
TGG
Pro
>WENV170195549
CEPJ01142110
392647
Alphaproteobacteria
GGT
Thr
>WENV170194034
CEPJ01005915
393349
Alphaproteobacteria
GGT
Thr
>WENV170194198
CEPJ01017904
393349
Alphaproteobacteria
GGT
Thr
>WENV170195311
CEPJ01124083
263684
Alphaproteobacteria
TTT
Lys
>WENV170195660
CEPJ01196693
93190
Alphaproteobacteria
CAA
Leu
>WENV170195398
CEPJ01131812
397793
Alphaproteobacteria
GCC
Gly
>WENV170194620
CEPJ01049193
278841
Alphaproteobacteria
TTT
Lys
>WENV170194774
CEPJ01065614
377113
Alphaproteobacteria
GAC
Val
>WENV170195020
CEPJ01092117
377113
Alphaproteobacteria
GAC
Val
>WENV170194316
CEPJ01025826
207103
Alphaproteobacteria
GTG
His
>WENV170195230
CEPJ01113720
26906
Alphaproteobacteria
GCT
Ser
>WENV170195401
CEPJ01132181
205335
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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