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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170194274
CEPJ01022371
139500
Bacteroidota
TGG
Pro
>WENV170194364
CEPJ01028975
139500
Bacteroidota
TGG
Pro
>WENV170194799
CEPJ01067829
260563
Bacteroidota
>WENV170194079
CEPJ01008864
139505
Bacteroidota
TAC
Val
>WENV170195107
CEPJ01101939
139505
Bacteroidota
TAC
Val
>WENV170195448
CEPJ01136521
220163
Bacteroidota
TCT
Arg
>WENV170194071
CEPJ01008619
116954
Bacteroidota
TAG
Leu
>WENV170194877
CEPJ01076571
211884
Bacteroidota
TGC
Ala
>WENV170194767
CEPJ01064756
263627
Bacteroidota
TTG
Gln
>WENV170194165
CEPJ01016001
177164
Bacteroidota
GTC
Asp
>WENV170195400
CEPJ01132114
177164
Bacteroidota
GTC
Asp
>WENV170194910
CEPJ01081516
160570
Bacteroidota
TCT
Arg
>WENV170195205
CEPJ01111528
188048
Bacteroidota
GGC
Ala
>WENV170194927
CEPJ01083463
144149
Bacteroidota
TGG
Pro
>WENV170195328
CEPJ01126020
144149
Bacteroidota
TGG
Pro
>WENV170195511
CEPJ01140525
144149
Bacteroidota
TGG
Pro
>WENV170195600
CEPJ01151045
263162
Bacteroidota
GGG
Pro
>WENV170194884
CEPJ01077836
321470
Bacteroidota
GAA
Phe
>WENV170194255
CEPJ01021774
50353
Bacteroidota
TGA
Ser
>WENV170195288
CEPJ01121914
24600
Bacteroidota
GGA
Ser
>WENV170194608
CEPJ01048342
263886
Bacteroidota
TTG
Gln
>WENV170194000
CEPJ01003445
232558
Bacteroidota
TGT
Thr
>WENV170195067
CEPJ01095874
160133
Bacteroidota
TCG
Arg
>WENV170194715
CEPJ01058998
310118
Bacteroidota
CCA
Trp
>WENV170194790
CEPJ01066927
310118
Bacteroidota
CCA
Trp
>WENV170194953
CEPJ01085718
310118
Bacteroidota
CCA
Trp
>WENV170195422
CEPJ01133661
310118
Bacteroidota
CCA
Trp
>WENV170195554
CEPJ01142169
310118
Bacteroidota
CCA
Trp
>WENV170194237
CEPJ01020676
18750
Bacteroidota
GGA
Ser
>WENV170194362
CEPJ01028936
311172
Bacteroidota
GAA
Phe
>WENV170195183
CEPJ01109198
301008
Bacteroidota
TTG
Gln
>WENV170195377
CEPJ01130041
301008
Bacteroidota
TTG
Gln
>WENV170195485
CEPJ01139306
301008
Bacteroidota
TTG
Gln
>WENV170195726
CEPJ01244798
89123
Bacteroidota
GCT
Ser
>WENV170194909
CEPJ01081516
68352
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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