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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200946
CEPP01017989
160464
Alphaproteobacteria
TAC
Val
>WENV170201083
CEPP01071521
217424
Alphaproteobacteria
GGG
Pro
>WENV170200905
CEPP01009316
105477
Alphaproteobacteria
TAA
Leu
>WENV170201004
CEPP01040841
448621
Alphaproteobacteria
GCA
Cys
>WENV170201024
CEPP01049160
109096
Alphaproteobacteria
TAG
Leu
>WENV170200949
CEPP01018533
382620
Alphaproteobacteria
GCC
Gly
>WENV170200919
CEPP01014402
278841
Alphaproteobacteria
TTT
Lys
>WENV170201001
CEPP01039179
325069
Alphaproteobacteria
TTT
Lys
>WENV170201009
CEPP01043850
159688
Alphaproteobacteria
CCT
Arg
>WENV170200953
CEPP01019327
323860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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