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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202304
CEPR01003942
161380
Bacteroidota
TCG
Arg
>WENV170202305
CEPR01003943
314601
Bacteroidota
>WENV170202616
CEPR01082864
175653
Bacteroidota
TGC
Ala
>WENV170202342
CEPR01010171
57357
Bacteroidota
TGA
Ser
>WENV170202332
CEPR01008444
311209
Bacteroidota
TTG
Gln
>WENV170202575
CEPR01060566
258133
Bacteroidota
>WENV170202516
CEPR01051196
223232
Bacteroidota
>WENV170202515
CEPR01051196
454104
Bacteroidota
GCA
Cys
>WENV170202331
CEPR01008443
24600
Bacteroidota
GGA
Ser
>WENV170202402
CEPR01021831
278064
Bacteroidota
CCA
Trp
>WENV170202314
CEPR01005744
311172
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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