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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202791
CEPS01006810
202800
Alphaproteobacteria
ACG
Arg
>WENV170203620
CEPS01071762
369984
Alphaproteobacteria
TTG
Gln
>WENV170202766
CEPS01005342
448544
Alphaproteobacteria
CTG
Gln
>WENV170203137
CEPS01027555
75752
Alphaproteobacteria
CAG
Leu
>WENV170203380
CEPS01046533
75752
Alphaproteobacteria
CAG
Leu
>WENV170204168
CEPS01155501
193605
Alphaproteobacteria
>WENV170202905
CEPS01012272
259563
Alphaproteobacteria
GGC
Ala
>WENV170203417
CEPS01050277
383286
Alphaproteobacteria
GGT
Thr
>WENV170203105
CEPS01024591
205536
Alphaproteobacteria
GAT
Ile
>WENV170203922
CEPS01096726
309182
Alphaproteobacteria
TAC
Val
>WENV170202762
CEPS01005017
307687
Alphaproteobacteria
GGC
Ala
>WENV170204118
CEPS01142033
162126
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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