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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170221447
CEQA01141177
196239
Gammaproteobacteria
TCT
Arg
>WENV170221328
CEQA01085752
466478
Gammaproteobacteria
GCA
Cys
>WENV170221398
CEQA01128026
26461
Gammaproteobacteria
TGA
Ser
>WENV170221164
CEQA01012014
65280
Gammaproteobacteria
TAA
Leu
>WENV170221392
CEQA01125227
158573
Gammaproteobacteria
CAT
Met
>WENV170221229
CEQA01031093
412618
Gammaproteobacteria
TTG
Gln
>WENV170221187
CEQA01018020
65089
Gammaproteobacteria
CAA
Leu
>WENV170221342
CEQA01095868
65331
Gammaproteobacteria
CAA
Leu
>WENV170221292
CEQA01054913
269026
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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