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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170224342
CEQE01047276
238438
Gammaproteobacteria
>WENV170223909
CEQE01014450
59177
Gammaproteobacteria
TAA
Leu
>WENV170223908
CEQE01014450
413586
Gammaproteobacteria
GCA
Cys
>WENV170224067
CEQE01025308
237221
Gammaproteobacteria
GGC
Ala
>WENV170224435
CEQE01054184
339596
Gammaproteobacteria
CCT
Arg
>WENV170223738
CEQE01002392
149038
Gammaproteobacteria
TGG
Pro
>WENV170223772
CEQE01004872
152301
Gammaproteobacteria
GAT
Ile
>WENV170224272
CEQE01041362
411842
Gammaproteobacteria
GCA
Cys
>WENV170224632
CEQE01069083
243485
Gammaproteobacteria
TGT
Thr
>WENV170224246
CEQE01039475
247088
Gammaproteobacteria
CCA
Trp
>WENV170224164
CEQE01033161
149037
Gammaproteobacteria
GAC
Val
>WENV170225792
CEQE01148866
45411
Gammaproteobacteria
GGA
Ser
>WENV170224198
CEQE01036177
16460
Gammaproteobacteria
TGA
Ser
>WENV170223734
CEQE01002200
147776
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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