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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170235505
CEQL01089310
139500
Bacteroidota
TGG
Pro
>WENV170236525
CEQL01327162
139505
Bacteroidota
TAC
Val
>WENV170235885
CEQL01132917
220163
Bacteroidota
TCT
Arg
>WENV170234725
CEQL01006343
139484
Bacteroidota
TAC
Val
>WENV170235139
CEQL01048681
139484
Bacteroidota
TAC
Val
>WENV170235830
CEQL01127275
139484
Bacteroidota
TAC
Val
>WENV170236071
CEQL01146198
139484
Bacteroidota
TAC
Val
>WENV170235172
CEQL01051680
57357
Bacteroidota
TGA
Ser
>WENV170235495
CEQL01087895
57357
Bacteroidota
TGA
Ser
>WENV170235865
CEQL01130701
170035
Bacteroidota
GTT
Asn
>WENV170235878
CEQL01131984
263627
Bacteroidota
TTG
Gln
>WENV170234925
CEQL01024435
49783
Bacteroidota
TGA
Ser
>WENV170234816
CEQL01013728
321470
Bacteroidota
GAA
Phe
>WENV170235132
CEQL01048142
310118
Bacteroidota
CCA
Trp
>WENV170234712
CEQL01005013
301008
Bacteroidota
TTG
Gln
>WENV170234963
CEQL01028638
301008
Bacteroidota
TTG
Gln
>WENV170235276
CEQL01063024
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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