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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170235084
CEQL01041116
277410
Gammaproteobacteria
TTT
Lys
>WENV170236115
CEQL01148099
256881
Gammaproteobacteria
GTG
His
>WENV170234931
CEQL01025176
195797
Gammaproteobacteria
ACG
Arg
>WENV170235313
CEQL01067096
18367
Gammaproteobacteria
GCT
Ser
>WENV170235025
CEQL01033998
309075
Gammaproteobacteria
GTT
Asn
>WENV170235231
CEQL01057312
451853
Gammaproteobacteria
GCA
Cys
>WENV170236258
CEQL01186448
172986
Gammaproteobacteria
CCA
Trp
>WENV170235307
CEQL01066578
325641
Gammaproteobacteria
CCA
Trp
>WENV170235540
CEQL01094029
448070
Gammaproteobacteria
GCA
Cys
>WENV170236116
CEQL01148099
106574
Gammaproteobacteria
TAG
Leu
>WENV170234894
CEQL01022025
257590
Gammaproteobacteria
GGT
Thr
>WENV170235347
CEQL01071071
257590
Gammaproteobacteria
GGT
Thr
>WENV170235403
CEQL01078428
307111
Gammaproteobacteria
TAC
Val
>WENV170235314
CEQL01067096
214281
Gammaproteobacteria
ACG
Arg
>WENV170235315
CEQL01067096
214281
Gammaproteobacteria
ACG
Arg
>WENV170234944
CEQL01026712
290512
Gammaproteobacteria
TGT
Thr
>WENV170234652
CEQL01000206
26256
Gammaproteobacteria
CGA
Ser
>WENV170235108
CEQL01044493
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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