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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170240332
CEQN01112375
177853
Bacteroidota
GAT
Ile
>WENV170239983
CEQN01084222
139500
Bacteroidota
TGG
Pro
>WENV170241583
CEQN01360612
108977
Bacteroidota
TAG
Leu
>WENV170239542
CEQN01048086
139505
Bacteroidota
TAC
Val
>WENV170240485
CEQN01129297
139505
Bacteroidota
TAC
Val
>WENV170240514
CEQN01133840
139505
Bacteroidota
TAC
Val
>WENV170239353
CEQN01034360
139484
Bacteroidota
TAC
Val
>WENV170240135
CEQN01098420
139484
Bacteroidota
TAC
Val
>WENV170240340
CEQN01113221
139484
Bacteroidota
TAC
Val
>WENV170241150
CEQN01201567
160349
Bacteroidota
GTG
His
>WENV170239944
CEQN01080995
194726
Bacteroidota
TGC
Ala
>WENV170240217
CEQN01104642
262571
Bacteroidota
GCC
Gly
>WENV170239530
CEQN01047281
263627
Bacteroidota
TTG
Gln
>WENV170239584
CEQN01051445
263627
Bacteroidota
TTG
Gln
>WENV170240977
CEQN01185298
263627
Bacteroidota
TTG
Gln
>WENV170241043
CEQN01192156
49783
Bacteroidota
TGA
Ser
>WENV170240450
CEQN01126152
177164
Bacteroidota
GTC
Asp
>WENV170241553
CEQN01350140
269121
Bacteroidota
TCC
Gly
>WENV170239872
CEQN01075433
144149
Bacteroidota
TGG
Pro
>WENV170241605
CEQN01367627
50353
Bacteroidota
TGA
Ser
>WENV170239830
CEQN01072247
265540
Bacteroidota
GAA
Phe
>WENV170241340
CEQN01211722
265540
Bacteroidota
GAA
Phe
>WENV170239795
CEQN01068545
168483
Bacteroidota
GTT
Asn
>WENV170239955
CEQN01082091
106261
Bacteroidota
TAG
Leu
>WENV170240066
CEQN01091503
268445
Bacteroidota
GAA
Phe
>WENV170239439
CEQN01040337
18750
Bacteroidota
GGA
Ser
>WENV170240590
CEQN01143907
18750
Bacteroidota
GGA
Ser
>WENV170239430
CEQN01039860
259964
Bacteroidota
>WENV170239223
CEQN01024927
158556
Bacteroidota
GTT
Asn
>WENV170240575
CEQN01141949
68352
Bacteroidota
GCT
Ser
>WENV170241207
CEQN01206026
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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