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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170240574
CEQN01141903
174334
Gammaproteobacteria
>WENV170240959
CEQN01183815
174334
Gammaproteobacteria
>WENV170241276
CEQN01209747
174334
Gammaproteobacteria
>WENV170240221
CEQN01104815
451765
Gammaproteobacteria
GCA
Cys
>WENV170241400
CEQN01238641
451765
Gammaproteobacteria
GCA
Cys
>WENV170241511
CEQN01330998
108980
Gammaproteobacteria
TAG
Leu
>WENV170239425
CEQN01039287
167122
Gammaproteobacteria
>WENV170239728
CEQN01063483
65736
Gammaproteobacteria
TAA
Leu
>WENV170240567
CEQN01140935
271191
Gammaproteobacteria
CCA
Trp
>WENV170241019
CEQN01189287
271191
Gammaproteobacteria
CCA
Trp
>WENV170241182
CEQN01203911
451853
Gammaproteobacteria
GCA
Cys
>WENV170241646
CEQN01372811
166420
Gammaproteobacteria
>WENV170239472
CEQN01042486
164285
Gammaproteobacteria
TCG
Arg
>WENV170239005
CEQN01008227
257590
Gammaproteobacteria
GGT
Thr
>WENV170240010
CEQN01087893
257590
Gammaproteobacteria
GGT
Thr
>WENV170238950
CEQN01003302
272258
Gammaproteobacteria
GGC
Ala
>WENV170239476
CEQN01042965
272258
Gammaproteobacteria
GGC
Ala
>WENV170239266
CEQN01027486
159341
Gammaproteobacteria
GAT
Ile
>WENV170240795
CEQN01167488
105812
Gammaproteobacteria
GTA
Tyr
>WENV170241615
CEQN01369762
261154
Gammaproteobacteria
TGC
Ala
>WENV170239833
CEQN01072571
265381
Gammaproteobacteria
GTT
Asn
>WENV170239915
CEQN01078278
265381
Gammaproteobacteria
GTT
Asn
>WENV170241035
CEQN01191319
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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