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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170241780
CEQO01009119
236125
Bacteroidota
GAA
Phe
>WENV170242590
CEQO01068107
127414
Bacteroidota
TGG
Pro
>WENV170242745
CEQO01080774
127414
Bacteroidota
TGG
Pro
>WENV170243935
CEQO01263644
127414
Bacteroidota
TGG
Pro
>WENV170241992
CEQO01023586
197220
Bacteroidota
TGT
Thr
>WENV170243095
CEQO01119219
193627
Bacteroidota
TCT
Arg
>WENV170242608
CEQO01070193
246641
Bacteroidota
GAA
Phe
>WENV170243556
CEQO01159672
165044
Bacteroidota
GTG
His
>WENV170243173
CEQO01126791
145555
Bacteroidota
GTC
Asp
>WENV170241810
CEQO01011248
185921
Bacteroidota
GTC
Asp
>WENV170242731
CEQO01079741
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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