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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170242807
CEQO01086638
184180
Bacteroidota
GTC
Asp
>WENV170244015
CEQO01280634
139505
Bacteroidota
TAC
Val
>WENV170243447
CEQO01152635
449969
Bacteroidota
GCA
Cys
>WENV170242332
CEQO01048146
139484
Bacteroidota
TAC
Val
>WENV170241963
CEQO01021610
57357
Bacteroidota
TGA
Ser
>WENV170241992
CEQO01023586
200621
Bacteroidota
TGT
Thr
>WENV170243565
CEQO01160353
262571
Bacteroidota
GCC
Gly
>WENV170241687
CEQO01002031
263627
Bacteroidota
TTG
Gln
>WENV170241868
CEQO01014671
263627
Bacteroidota
TTG
Gln
>WENV170243329
CEQO01142799
263627
Bacteroidota
TTG
Gln
>WENV170241810
CEQO01011248
177164
Bacteroidota
GTC
Asp
>WENV170242590
CEQO01068107
144149
Bacteroidota
TGG
Pro
>WENV170242745
CEQO01080774
144149
Bacteroidota
TGG
Pro
>WENV170242561
CEQO01065683
321470
Bacteroidota
GAA
Phe
>WENV170242608
CEQO01070193
321470
Bacteroidota
GAA
Phe
>WENV170241796
CEQO01010169
310118
Bacteroidota
CCA
Trp
>WENV170241990
CEQO01023409
310118
Bacteroidota
CCA
Trp
>WENV170242125
CEQO01032399
310118
Bacteroidota
CCA
Trp
>WENV170242614
CEQO01070546
310118
Bacteroidota
CCA
Trp
>WENV170243154
CEQO01125166
310118
Bacteroidota
CCA
Trp
>WENV170243188
CEQO01130009
310118
Bacteroidota
CCA
Trp
>WENV170243205
CEQO01132014
310118
Bacteroidota
CCA
Trp
>WENV170242128
CEQO01032508
18750
Bacteroidota
GGA
Ser
>WENV170243074
CEQO01117594
18750
Bacteroidota
GGA
Ser
>WENV170241780
CEQO01009119
311172
Bacteroidota
GAA
Phe
>WENV170242634
CEQO01072143
301008
Bacteroidota
TTG
Gln
>WENV170243405
CEQO01149098
301008
Bacteroidota
TTG
Gln
>WENV170243556
CEQO01159672
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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