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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170245625
CEQP01110895
256995
Actinomycetota
CGC
Ala
>WENV170246017
CEQP01144480
259969
Actinomycetota
CTT
Lys
>WENV170245821
CEQP01129165
167859
Actinomycetota
TGT
Thr
>WENV170245322
CEQP01086280
258812
Actinomycetota
CCA
Trp
>WENV170245870
CEQP01132694
258812
Actinomycetota
CCA
Trp
>WENV170244986
CEQP01060264
319518
Actinomycetota
GGC
Ala
>WENV170245681
CEQP01115411
319518
Actinomycetota
GGC
Ala
>WENV170245404
CEQP01092853
269056
Actinomycetota
TAC
Val
>WENV170246716
CEQP01302172
236280
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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