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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170245252
CEQP01081471
160199
Alphaproteobacteria
GGG
Pro
>WENV170246420
CEQP01170819
34302
Alphaproteobacteria
TGA
Ser
>WENV170246540
CEQP01238067
88860
Alphaproteobacteria
TAA
Leu
>WENV170246731
CEQP01306212
202800
Alphaproteobacteria
ACG
Arg
>WENV170245609
CEQP01109576
448544
Alphaproteobacteria
CTG
Gln
>WENV170246522
CEQP01230289
448544
Alphaproteobacteria
CTG
Gln
>WENV170245850
CEQP01131228
396582
Alphaproteobacteria
GAC
Val
>WENV170245968
CEQP01141078
160201
Alphaproteobacteria
TGG
Pro
>WENV170246150
CEQP01153657
26668
Alphaproteobacteria
GCT
Ser
>WENV170246482
CEQP01210619
159281
Alphaproteobacteria
GTG
His
>WENV170245953
CEQP01140207
469905
Alphaproteobacteria
CCC
Gly
>WENV170245557
CEQP01105434
383286
Alphaproteobacteria
GGT
Thr
>WENV170245225
CEQP01079376
448545
Alphaproteobacteria
>WENV170246627
CEQP01272380
160197
Alphaproteobacteria
GTC
Asp
>WENV170245642
CEQP01112211
325069
Alphaproteobacteria
TTT
Lys
>WENV170246676
CEQP01294072
160575
Alphaproteobacteria
CCT
Arg
>WENV170246582
CEQP01256520
238723
Alphaproteobacteria
GTG
His
>WENV170245760
CEQP01122705
382308
Alphaproteobacteria
GAA
Phe
>WENV170246781
CEQP01313790
309182
Alphaproteobacteria
TAC
Val
>WENV170246330
CEQP01163585
105419
Alphaproteobacteria
TAA
Leu
>WENV170245567
CEQP01106563
65064
Alphaproteobacteria
GAG
Leu
>WENV170245812
CEQP01128598
88722
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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