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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170246742
CEQP01308716
448526
Bacteroidota
TTG
Gln
>WENV170246535
CEQP01236384
259007
Bacteroidota
TTT
Lys
>WENV170245935
CEQP01138990
57357
Bacteroidota
TGA
Ser
>WENV170246172
CEQP01154955
170035
Bacteroidota
GTT
Asn
>WENV170244296
CEQP01013508
263627
Bacteroidota
TTG
Gln
>WENV170246291
CEQP01162253
263627
Bacteroidota
TTG
Gln
>WENV170246584
CEQP01257204
237987
Bacteroidota
CAT
Met
>WENV170244302
CEQP01013791
119207
Bacteroidota
TAG
Leu
>WENV170245573
CEQP01107057
119207
Bacteroidota
TAG
Leu
>WENV170245348
CEQP01088760
144149
Bacteroidota
TGG
Pro
>WENV170245533
CEQP01102761
50353
Bacteroidota
TGA
Ser
>WENV170245410
CEQP01093113
168483
Bacteroidota
GTT
Asn
>WENV170246560
CEQP01248516
105409
Bacteroidota
TAG
Leu
>WENV170246730
CEQP01306080
232894
Bacteroidota
GTG
His
>WENV170245910
CEQP01135852
310118
Bacteroidota
CCA
Trp
>WENV170246107
CEQP01149519
310118
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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