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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170246509
CEQP01226237
477494
Gammaproteobacteria
TCC
Gly
>WENV170246616
CEQP01269565
196239
Gammaproteobacteria
TCT
Arg
>WENV170244147
CEQP01003909
174334
Gammaproteobacteria
>WENV170246452
CEQP01193421
18367
Gammaproteobacteria
GCT
Ser
>WENV170244952
CEQP01056888
309075
Gammaproteobacteria
GTT
Asn
>WENV170246127
CEQP01151845
261853
Gammaproteobacteria
GTT
Asn
>WENV170245849
CEQP01131226
263392
Gammaproteobacteria
GAA
Phe
>WENV170244640
CEQP01036344
65736
Gammaproteobacteria
TAA
Leu
>WENV170246048
CEQP01145529
65736
Gammaproteobacteria
TAA
Leu
>WENV170245986
CEQP01142201
271191
Gammaproteobacteria
CCA
Trp
>WENV170245705
CEQP01117629
172986
Gammaproteobacteria
CCA
Trp
>WENV170245196
CEQP01076429
412618
Gammaproteobacteria
TTG
Gln
>WENV170244837
CEQP01047651
325641
Gammaproteobacteria
CCA
Trp
>WENV170245475
CEQP01098037
448070
Gammaproteobacteria
GCA
Cys
>WENV170244750
CEQP01042480
193317
Gammaproteobacteria
TGG
Pro
>WENV170245794
CEQP01126471
163448
Gammaproteobacteria
TCT
Arg
>WENV170246510
CEQP01226237
369546
Gammaproteobacteria
GGT
Thr
>WENV170244253
CEQP01010734
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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