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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170248166
CEQQ01101797
448974
Gammaproteobacteria
GCA
Cys
>WENV170246918
CEQQ01004675
256881
Gammaproteobacteria
GTG
His
>WENV170247969
CEQQ01083053
18367
Gammaproteobacteria
GCT
Ser
>WENV170247811
CEQQ01068662
108980
Gammaproteobacteria
TAG
Leu
>WENV170247791
CEQQ01066322
113189
Gammaproteobacteria
GAG
Leu
>WENV170248190
CEQQ01104183
167122
Gammaproteobacteria
>WENV170247637
CEQQ01053254
260947
Gammaproteobacteria
TTG
Gln
>WENV170248339
CEQQ01122615
65163
Gammaproteobacteria
CAA
Leu
>WENV170248356
CEQQ01124792
271191
Gammaproteobacteria
CCA
Trp
>WENV170248703
CEQQ01173272
325641
Gammaproteobacteria
CCA
Trp
>WENV170248847
CEQQ01226015
448070
Gammaproteobacteria
GCA
Cys
>WENV170246916
CEQQ01004649
263086
Gammaproteobacteria
GTT
Asn
>WENV170246919
CEQQ01004675
106574
Gammaproteobacteria
TAG
Leu
>WENV170247496
CEQQ01042437
323307
Gammaproteobacteria
GGT
Thr
>WENV170246874
CEQQ01002704
263347
Gammaproteobacteria
TTT
Lys
>WENV170248209
CEQQ01106012
196918
Gammaproteobacteria
CCG
Arg
>WENV170247016
CEQQ01010170
214281
Gammaproteobacteria
ACG
Arg
>WENV170248884
CEQQ01232007
161115
Gammaproteobacteria
CCG
Arg
>WENV170247495
CEQQ01042437
105812
Gammaproteobacteria
GTA
Tyr
>WENV170248516
CEQQ01136390
26256
Gammaproteobacteria
CGA
Ser
>WENV170248547
CEQQ01139265
258828
Gammaproteobacteria
TGT
Thr
>WENV170248839
CEQQ01224877
161319
Gammaproteobacteria
>WENV170248557
CEQQ01140402
65858
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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