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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170250838
CEQT01026384
396582
Alphaproteobacteria
GAC
Val
>WENV170252204
CEQT01262780
166628
Alphaproteobacteria
CAT
Met
>WENV170250646
CEQT01005751
259585
Alphaproteobacteria
CCA
Trp
>WENV170250784
CEQT01019346
125595
Alphaproteobacteria
>WENV170251150
CEQT01064271
278841
Alphaproteobacteria
TTT
Lys
>WENV170251802
CEQT01138177
278841
Alphaproteobacteria
TTT
Lys
>WENV170251541
CEQT01111798
203353
Alphaproteobacteria
CAT
Met
>WENV170251681
CEQT01128301
205335
Alphaproteobacteria
GGG
Pro
>WENV170251024
CEQT01047558
26306
Alphaproteobacteria
TGA
Ser
>WENV170250979
CEQT01042689
163875
Alphaproteobacteria
ACG
Arg
>WENV170250715
CEQT01011919
323860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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