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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170252229
CEQT01270400
448526
Bacteroidota
TTG
Gln
>WENV170251222
CEQT01072042
139484
Bacteroidota
TAC
Val
>WENV170251327
CEQT01082980
139484
Bacteroidota
TAC
Val
>WENV170250647
CEQT01005754
50342
Bacteroidota
TGA
Ser
>WENV170252253
CEQT01275137
67292
Bacteroidota
GAG
Leu
>WENV170251078
CEQT01053989
49783
Bacteroidota
TGA
Ser
>WENV170250915
CEQT01035252
177164
Bacteroidota
GTC
Asp
>WENV170251401
CEQT01093284
144149
Bacteroidota
TGG
Pro
>WENV170252186
CEQT01256807
161858
Bacteroidota
GGG
Pro
>WENV170252000
CEQT01188822
161476
Bacteroidota
>WENV170250763
CEQT01017312
168483
Bacteroidota
GTT
Asn
>WENV170250821
CEQT01023876
168483
Bacteroidota
GTT
Asn
>WENV170251621
CEQT01120800
210921
Bacteroidota
GGC
Ala
>WENV170250760
CEQT01017112
310118
Bacteroidota
CCA
Trp
>WENV170251619
CEQT01120129
310118
Bacteroidota
CCA
Trp
>WENV170252185
CEQT01256547
158528
Bacteroidota
>WENV170251406
CEQT01094244
23145
Bacteroidota
GGA
Ser
>WENV170251537
CEQT01111053
301008
Bacteroidota
TTG
Gln
>WENV170252264
CEQT01276892
89123
Bacteroidota
GCT
Ser
>WENV170251982
CEQT01183291
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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